Genome Clustering From Linguistic Models to Classification of Genetic Texts /

The study of language texts at the level of formal non-semantic models has a long history. Suffice it to say that the well-known Markov chains were first introduced as one of such models. The representation of biological data as text and, consequently, applications of text-analysis models in the fie...

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Bibliographic Details
Main Authors: Bolshoy, Alexander. (Author), Volkovich, Zeev (Vladimir). (Author), Kirzhner, Valery. (Author), Barzily, Zeev. (Author)
Corporate Author: SpringerLink (Online service)
Format: Electronic
Language:English
Published: Berlin, Heidelberg : Springer Berlin Heidelberg, 2010.
Series:Studies in Computational Intelligence, 286
Subjects:
Online Access:https://ezaccess.library.uitm.edu.my/login?url=http://dx.doi.org/10.1007/978-3-642-12952-0
Table of Contents:
  • Part 1 Biological Background
  • Part 2 Biological Classification
  • Part 3 Mathematical Models for the Analysis of Natural-Language Documents
  • Part 4 DNA Texts
  • Part 5 N-gram Spectra of the DNA Text
  • Part 6 Application of Compositional Spectra to DNA Sequences
  • Part 7 Marker-Function Profile-Based Clustering
  • Part 8 Genome as a Bag of Genes  the Whole-Genome Phylogenetics
  • Part 9 Appendix A. Clustering Methods
  • Part 10 Appendix B. Sequence Complexity
  • Part 11 Appendix C. DNA curvature.